Index

A

AnalysisTask (class in deepscribe.pipeline.analysis)

C

CNN2Conv (class in deepscribe.models.cnn) cnn_classifier_2conv() (in module deepscribe.models.baselines)

cnn_classifier_4conv() (in module deepscribe.models.baselines) CNNAugment (class in deepscribe.models.cnn)

D

deepscribe.models.baselines (module) deepscribe.models.cnn (module) deepscribe.models.parametermodel (module) deepscribe.pipeline.aggregation (module)

deepscribe.pipeline.analysis (module) deepscribe.pipeline.images (module) deepscribe.pipeline.selection (module) deepscribe.pipeline.training (module)

G

GenerateClassificationReportTask (class in deepscribe.pipeline.analysis)

L

load_def() (deepscribe.pipeline.training.RunTalosScanTask method) (deepscribe.pipeline.training.TrainKerasModelFromDefinitionTask method) (deepscribe.pipeline.training.TrainModelFromDefinitionTask method)

O

OchreDatasetTask (class in deepscribe.pipeline.aggregation) OchreToHD5Task (class in deepscribe.pipeline.aggregation) output() (deepscribe.pipeline.aggregation.OchreDatasetTask method) (deepscribe.pipeline.aggregation.OchreToHD5Task method) (deepscribe.pipeline.analysis.GenerateClassificationReportTask method) (deepscribe.pipeline.analysis.PlotConfusionMatrixTask method) (deepscribe.pipeline.analysis.PlotIncorrectTask method) (deepscribe.pipeline.images.ProcessImageTask method) (deepscribe.pipeline.selection.SelectDatasetTask method) (deepscribe.pipeline.training.RunTalosScanTask method) (deepscribe.pipeline.training.TrainKerasModelFromDefinitionTask method)

P

ParameterModel (class in deepscribe.models.parametermodel) PlotConfusionMatrixTask (class in deepscribe.pipeline.analysis) PlotIncorrectTask (class in deepscribe.pipeline.analysis) process_image() (deepscribe.pipeline.images.ProcessImageTask method) (deepscribe.pipeline.images.RescaleImageValuesTask method) (deepscribe.pipeline.images.StandardizeImageSizeTask method) (deepscribe.pipeline.images.ThresholdImageTask method)

ProcessImageTask (class in deepscribe.pipeline.images)

R

requires() (deepscribe.pipeline.aggregation.OchreToHD5Task method) (deepscribe.pipeline.analysis.AnalysisTask method) (deepscribe.pipeline.analysis.RunAnalysisOnTestDataTask method) (deepscribe.pipeline.images.RescaleImageValuesTask method) (deepscribe.pipeline.images.StandardizeImageSizeTask method) (deepscribe.pipeline.images.ThresholdImageTask method) (deepscribe.pipeline.selection.SelectDatasetTask method) (deepscribe.pipeline.training.TrainModelFromDefinitionTask method) RescaleImageValuesTask (class in deepscribe.pipeline.images) ResNet50 (class in deepscribe.models.cnn) ResNet50V2 (class in deepscribe.models.cnn)

run() (deepscribe.pipeline.aggregation.OchreToHD5Task method) (deepscribe.pipeline.analysis.GenerateClassificationReportTask method) (deepscribe.pipeline.analysis.PlotConfusionMatrixTask method) (deepscribe.pipeline.analysis.PlotIncorrectTask method) (deepscribe.pipeline.images.ProcessImageTask method) (deepscribe.pipeline.selection.SelectDatasetTask method) (deepscribe.pipeline.training.TrainModelFromDefinitionTask method) run_training() (deepscribe.pipeline.training.RunTalosScanTask method) (deepscribe.pipeline.training.TrainKerasModelFromDefinitionTask method) (deepscribe.pipeline.training.TrainModelFromDefinitionTask method) RunAnalysisOnTestDataTask (class in deepscribe.pipeline.analysis) RunTalosScanTask (class in deepscribe.pipeline.training)

S

SelectDatasetTask (class in deepscribe.pipeline.selection)

StandardizeImageSizeTask (class in deepscribe.pipeline.images)

T

ThresholdImageTask (class in deepscribe.pipeline.images)

TrainKerasModelFromDefinitionTask (class in deepscribe.pipeline.training) TrainModelFromDefinitionTask (class in deepscribe.pipeline.training)

V

VGG16 (class in deepscribe.models.cnn)

VGG19 (class in deepscribe.models.cnn)